Heart-hugging robot does the twist (and squeeze)

A new squishy robot could keep hearts from skipping a beat.

A silicone sleeve slipped over pigs’ hearts helped pump blood when the hearts failed, researchers report January 18 in Science Translational Medicine. If the sleeve works in humans, it could potentially keep weak hearts pumping, and buy time for patients waiting for a transplant.

To make the device contract, biomedical engineer Ellen Roche and colleagues lined it with two sets of narrow tubes. One set encircles the sleeve, like bracelets; the other runs from top to bottom. When air pumps through the tubes, the sleeve compresses (like a clenched fist) and twists (like wrung-out laundry). Those actions mimic how the layers of the heart contract.
Researchers programmed the sleeve to sync with the heart’s motion. And like a healthy heart, the robot sleeve’s double squeeze gets blood moving.

Roche’s team, which did the work while she was at Harvard University, triggered heart failure in six pigs and then measured the volume of blood pumped by the heart with and without the sleeve’s help. Heart failure cut the volume roughly in half, to about 1 liter of blood per minute. But the sleeve restored the pumped volume to about 2½ liters per minute — just about normal, Roche, now at National University of Ireland, Galway, and colleagues report.

Big genetics study blazes path for bringing back tomato flavor

An analysis of nearly 400 kinds of tomatoes suggests which flavor compounds could bring heirloom deliciousness back to varieties that were bred for toughness over taste.

About 30 compounds are important in creating a full-bodied tomato flavor, says study coauthor Harry Klee of the University of Florida in Gainesville. He and colleagues have identified 13 important molecules that have dwindled away in many mass-market varieties. Some of the flavor compounds deliver such a thrill to the human sensory system that even a modest increase could make a big difference, the researchers report January 26 in Science.
“I think this will definitely help,” says Alisdair Fernie, who was not part of the study but has studied tomato chemistry at the Max Planck Institute of Molecular Plant Physiology in Potsdam, Germany. “Taste is incredibly complex,” he says, so creating more appealing commercial varieties “for certain, requires a holistic approach,” he says.

To achieve that holistic view, the researchers teamed up with geneticists at China’s Agricultural Genomics Institute in Shenzhen, who determined the full genetic makeup of a whopping 398 kinds of tomatoes, wild as well as heirloom and commercial. The scientists ran 96 varieties of tomatoes through taste-testing panels, looking for genetic and chemical similarities among those varieties ranked tastiest.

Much of what makes some tomatoes taste better is actually smell, Klee points out. Tongues can detect relatively few qualities, such as sweetness, acidity and softness. Chemical detectors in the nasal passages are far more varied and sensitive. So what really puts the “Mmmm” into a tomato is the whoosh of air forced up into the nasal passages as someone swallows. Airborne compounds, known as volatiles, are abundant in tomatoes, and Klee looks to them for flavor magic.

Of these volatile compounds, some appear in even the tastiest tomatoes at minuscule levels — only parts per trillion. But human senses respond so strongly to the odors that a little bit goes a long way. Tomatoes should taste noticeably better if researchers can breed just four or five heirloom versions of volatile-producing genes back into commercial varieties, Klee says.

Increasing the sweetness of today’s tomatoes, on the other hand, may be tougher. About 80 percent of the sugar in commercial tomatoes comes from the leaves and is transferred to the big red globes as they mature (SN: 7/28/12, p. 18). Because breeders have done such a great job of maximizing the number of fruits on a plant, the plants would need lots of leaves to sweeten them all. So the price of sweeter tomatoes would be making them smaller, and fewer.
“Now we come to the real crux of the problem,” Klee says. “I have to fix the flavor, but I can’t compromise all of the stuff that breeders have done to the modern tomatoes to make them healthier, more productive, more disease resistant and more shippable,” he says.

And let’s not forget about what happens to tomatoes after they’re picked, says Ann Powell, who studied tomato ripening and disease resistance at the University of California, Davis and is now at the National Science Foundation. Cooling weakens flavor, as cooks who shriek at the horror of storing tomatoes in refrigerators have long known. Therefore, Powell says, another study of Klee’s from 2016 — on how chilling can turn on and off genes — makes an important companion to the new work. A combination of breeding better plants and coddling them strategically may be the way forward for tastier tomatoes.

DNA points to millennia of stability in East Asian hunter-fisher population

In a remote corner of eastern Russia, where long winters bring temperatures that rarely flicker above freezing, the genetic legacy of ancient hunter-gatherers endures.

DNA from the 7,700-year-old remains of two women is surprisingly similar to that of people living in that area today, researchers report February 1 in Science Advances. That finding suggests that at least some people in East Asia haven’t changed much over the last 8,000 years or so — a time when other parts of the world saw waves of migrants settle in.
“The continuity is remarkable,” says paleogeneticist Carles Lalueza-Fox of the Institute of Evolutionary Biology in Barcelona, who was not involved with the work. “It’s a big contrast to what has been found in Europe.”

In Western Europe especially, scientists studying ancient DNA have put together a picture of flux, says study coauthor Andrea Manica. “Every few thousand years, there are major turnovers of people.” Around 8,000 years ago, he says, migrating farmers replaced hunter-gatherers in the area. And a few thousand years after that, Bronze Age migrants from Central Asia swept in.

In DNA collected from the bones and teeth of these ancient peoples, scientists can spot genetic signatures of different populations. When a population of farmers balloons, Lalueza-Fox says, the signatures of hunter-gatherers are mostly erased.

But whether that’s true across the globe is unclear, says Manica, of the University of Cambridge. “We wanted to see what happened in other places…. Asia is huge compared to Europe, and it’s been neglected.”
Manica’s team collected DNA from the skeletons of five ancient people found in a cave called Devil’s Gate. The cave rests in a far east finger of Russia, tucked along the border of China and North Korea, and holds human remains, scraps of textiles and bits of broken pottery.

Researchers gathered enough DNA from two of the people to piece together about 6 percent of the genome, the complete set of genetic instructions inside a cell’s nucleus. That’s not much, Manica says, but it’s enough to compare the Devil’s Gate denizens with other people. The researchers analyzed the genomes of people strewn across the far reaches of the continent — from the Dolgan in Siberia to the Thai thousands of kilometers south.

Genetically, the 7,700-year-old women closely resembled the Ulchi, a small group of hunter-fishers who still live off the land today. Manica can’t say whether the Ulchi are direct descendants of the two Devil’s Gate women, or just closely related. But the find suggests a pocket of stability in East Asia — a place where hunter-gatherers weren’t swept out by, or folded into, booming groups of farmers.

Perhaps farming didn’t take off there because the cold climate wasn’t good for growing crops, Manica says. Or maybe the ideas and technologies from farmers and other migrants made it to the Ulchi without an accompanying influx of people. (The Ulchi aren’t like primitive hunter-gatherers of the past. They farm a bit, and have adopted new ways to fish, hunt and store food, he points out.)

“This shows that ideas can travel without people moving with them,” Manica says.

That makes sense, Lalueza-Fox says. But scientists now need more data — additional samples from East Asia, and Southeast Asia, too, he says. “I have a feeling the whole story will be much more complicated.”

Mapping rainforest chemistry from the air reveals 36 types of forest

To some forest creatures, a tree is a home. To scientists, it’s a beacon. A new way of mapping forests from the air by measuring chemical signatures of the tree canopy is revealing previously unrecognized biodiversity.

The swath of tropical forest covering the Peruvian Andes Mountains and the Amazon basin is one of the most biodiverse places on Earth. But it’s such a wild and remote region that variation within the forest is hard to spot.
“If you look in Google Earth, it just looks like a big green blanket,” says study coauthor Greg Asner, an ecologist at the Carnegie Institution for Science in Stanford, Calif.

Up close, it’s a different story. Each tree species has a distinctive set of chemical traits, such as levels of nutrients like nitrogen and phosphorus in the leaves. Collectively, those characteristics can reveal a lot about the makeup of the forest.
To peek beneath the green blanket, Asner and colleagues divided 76 million hectares of forest into 100-kilometer squares. The researchers measured levels of water, nitrogen, phosphorus and calcium in the trees’ leaves via aircraft by measuring the wavelengths of light reflected by the forest canopy, taking samples from small areas of each square. They also mapped leaf levels of lignins and polyphenols, two chemicals used for defense. Using that data, the scientists identified 36 unique types of forest — a much more nuanced view than the broad categories currently used for classification, the researchers report January 27 in Science. They parceled those highly specific forest types into six groups that roughly aligned with the country’s topography and geography.
Parsing out these differences in forests at such a fine scale is important for guiding conservation efforts, Asner says. A particular spot might appear at a distance to be the same as its surroundings but may actually contain species found nowhere else.

The team is now carrying out similar studies in northern Borneo and Ecuador. Eventually the researchers hope to boost their sensors into orbit to map biodiversity around the globe.

Science’s questions rarely have clear, easy answers

There are few simple answers in science. Even seemingly straightforward questions, when probed by people in search of proof, lead to more questions. Those questions lead to nuances, layers of complexity and, more often than we might expect, conclusions that contradict initial intuition.

In the 1990s, researchers asking “How do we fight oxygen-hungry cancer cells?” offered an obvious solution: Starve them of oxygen by cutting off their blood supply. But as Laura Beil describes in “Deflating cancer”, oxygen deprivation actually drives cancer to grow and spread. Scientists have responded by seeking new strategies: Block the formation of collagen highways, for instance, or even, as Beil writes, give the cells “more blood, not less.”
In “DNA tests inflate species counts,” Tina Hesman Saey reports on the complications of classifying species. Genetic analyses alone, she writes, can detect too many differences, overestimating species numbers. Some tools appear to be, as Darwin would have put it, “hair-splitters” rather than “lumpers.” Identifying species is hard in part because “What is a species?” has no single answer. The notion of reproductive isolation, which splits species according to whether they can produce fertile offspring, has little meaning for asexual organisms, for instance. And isolation itself is a matter of degree. Accounting for speciation in progress is yet another challenge. At what point is a split declared official?

There are countless more examples. The question of what led to the dinosaurs’ demise was solved years ago, we thought. But remaining mysteries inspired a special report earlier this year (SN: 2/4/17, p. 16). And don’t even get me started on “How long does a neutron last?” in Emily Conover’s story “Neutron longevity remains elusive.”

In The Pursuit of Simplicity, physicist Edward Teller described science as a search for simplicity. If that’s the case, the quest is never-ending. With each new insight comes yearning for further insights. I cannot, at this moment, think of a single question that doesn’t demand more exploration. There are answers to be sure, and scientific truths, but for what line of questioning are all the details resolved? Where isn’t there a lingering “why” or “how”? (Think that I’m wrong? Send your ideas to editors@sciencenews.org.)

Wanting to know is innate. Children ask “Why is the sky blue?” or “Where do babies come from?” And parents struggle to answer at the right level of detail. Where does the question begin, and where does it end? What is the best angle of approach? As kids grow up, their questions become more specific, and the answers they receive more complex. Perhaps it’s the students who most appreciate complexity who decide to become scientists. They learn to use the tools of science, which uncovered the complexity in the first place, to try to tame it — diving in ever deeper. And so people end up studying dim and distant galaxies to understand “How did the universe evolve?”, and vats of microbes and methylmercury to ask “How will climate change affect food webs?”

Simplicity may be a gift, but I think complexity is much more interesting. It is one of the great joys of doing science — and of writing about it.

‘Monkeytalk’ invites readers into the complex social world of monkeys

The social lives of macaques and baboons play out in what primatologist Julia Fischer calls “a magnificent opera.” When young Barbary macaques reach about 6 months, they fight nightly with their mothers. Young ones want the “maternal embrace” as they snooze; mothers want precious alone time. Getting pushed away and bitten by dear old mom doesn’t deter young macaques. But they’re on their own when a new brother or sister comes along.
In Monkeytalk, Fischer describes how the monkey species she studies have evolved their own forms of intelligence and communication. Connections exist between monkey and human minds, but Fischer regards differences among primate species as particularly compelling. She connects lab studies of monkeys and apes to her observations of wild monkeys while mixing in offbeat personal anecdotes of life in the field.

Fischer catapulted into a career chasing down monkeys in 1993. While still in college, she monitored captive Barbary macaques. That led to fieldwork among wild macaques in Morocco. In macaque communities, females hold central roles because young males move to other groups to mate. Members of closely related, cooperative female clans gain an edge in competing for status with male newcomers. Still, adult males typically outrank females. Fischer describes how the monkeys strategically alternate between attacking and forging alliances.

After forging her own key scientific alliances, Fischer moved on to study baboons in Africa, where she entered the bureaucratic jungle. Obtaining papers for a car in Senegal, for instance, took Fischer several days. She first had to shop for a snazzy outfit to impress male paper-pushers, she says. Fischer and her local guide then shuttled from one government official to another until a well-timed phone call from a local police chief to a key bureaucrat finally produced the forms.

Monkeys get the job done using their own brand of intelligence, Fischer writes. Macaques and baboons navigate their home regions expertly, discern small quantities and object sizes pretty well, and know who’s socially dominant over whom. These abilities are somewhat humanlike, but Fischer draws a bright line between monkeys’ and people’s social lives. Our primate relatives specialize in tracking comrades’ behaviors, she holds, rather than trying to infer others’ plans and desires. And unlike human groups, monkey communities don’t steadily accumulate knowledge and innovations or communicate in languagelike ways, Fischer contends.

So what if monkeys don’t write books or gossip about each other? Their social lives are complex enough to remain largely a mystery to humans, Fischer concludes. The gritty work of conducting long-term studies, especially in the wild, can illuminate the worlds inhabited by monkeys.

Making a mistake can put your brain on ‘pause’

Mistakes can be learning opportunities, but the brain needs time for lessons to sink in.

When facing a fast and furious stream of decisions, even the momentary distraction of noting an error can decrease accuracy on the next choice, researchers report in the March 15 Journal of Neuroscience.

“We have a brain region that monitors and says ‘you messed up’ so that we can correct our behavior,” says psychologist George Buzzell, now at the University of Maryland in College Park. But sometimes, that monitoring system can backfire, distracting us from the task at hand and causing us to make another error.
“There does seem to be a little bit of time for people, after mistakes, where you’re sort of offline,” says Jason Moser, a psychologist at Michigan State University in East Lansing, who wasn’t part of the study.

To test people’s response to making mistakes, Buzzell and colleagues at George Mason University in Fairfax, Va., monitored 23 participants’ brain activity while they worked through a challenging task. Concentric circles flashed briefly on a screen, and participants had to respond with one hand if the two circles were the same color and the other hand if the circles were subtly different shades.

After making a mistake, participants generally answered the next question correctly if they had a second or so to recover. But when the next challenge came very quickly after an error, as little as 0.2 seconds, accuracy dropped by about 10 percent. Electrical activity recorded from the visual cortex showed that participants paid less attention to the next trial if they had just made a mistake than if they had responded correctly.

The cognitive demand of noting and processing the error seems to divert attention that would otherwise be devoted to the task, Buzzell says.

In real life, people usually have time — even if just a few seconds — to reflect on a mistake before having to make another decision, says Jan Wessel, a psychologist at the University of Iowa in Iowa City. But in some activities such as driving a car or playing a musical instrument, people must rebound from errors quickly while continuing to correctly carry out the rest of the task, he says. Those actions might push the limits of error processing.

Tool use in sea otters doesn’t run in the family

Aside from being adorable, sea otters and Indo-Pacific bottlenose dolphins share an ecological feat: Both species use tools. Otters crack open snails with rocks, and dolphins carry cone-shaped sponges to protect their snouts while scavenging for rock dwelling fish.

Researchers have linked tool use in dolphins to a set of differences in mitochondrial DNA — which passes from mother to offspring — suggesting that tool-use behavior may be inherited. Biologist Katherine Ralls of the Smithsonian Institution in Washington, D.C., and her colleagues looked for a similar pattern in otters off the California coast. The team tracked diet (primarily abalone, crab, mussels, clams, urchins or snails) and tool use in the wild and analyzed DNA from 197 individual otters.

Otters that ate lots of hard-shelled snails — and used tools most frequently — rarely shared a common pattern in mitochondrial DNA, nor were they more closely related to other tool-users than any other otter in the population.

Unlike dolphins, sea otters may all be predisposed to using tools because their ancestors probably lived off mollusks, which required cracking open. However, modern otters only take up tools when their diet requires them, the researchers report March 21 in Biology Letters.

Math-anxious brains tackle simple problems differently

SAN FRANCISCO — When faced with simple math problems, people who get jittery about the subject may rely more heavily on certain brain circuitry than math-savvy people do. The different mental approach could help explain why people with math anxiety struggle on more complicated problems, researchers reported March 25 at the Cognitive Neuroscience Society’s annual meeting.

While in fMRI machines, adults with and without math anxiety evaluated whether simple arithmetic problems, such as 9+2=11, were correct or incorrect. Both groups had similar response times and accuracy on the problems, but brain scans turned up differences.

Specifically, in people who weren’t anxious about math, lower activation of the frontoparietal attention network was linked to better performance. That brain network is involved in working memory and problem solving. Math-anxious people showed no correlation between performance and frontoparietal network activity.

People who used the circuit less were probably getting ahead by automating simple arithmetic, said Hyesang Chang, a cognitive neuroscientist at the University of Chicago. Because math-anxious people showed more variable brain activity overall, Chang speculated that they might instead be using a variety of computationally demanding strategies. This scattershot approach works fine for simple math, she said, but might get maxed out when the math is more challenging.

First fluorescent frogs might see each others’ glow

Could fluorescence matter to a frog? Carlos Taboada wondered. They don’t have bedroom black lights, but their glow may still be about the night moves.

Taboada’s question is new to herpetology. No one had shown fluorescence in amphibians, or in any land vertebrate except parrots, until he and colleagues recently tested South American polka dot tree frogs. Under white light, male and female Hypsiboas punctatus frogs have translucent skin speckled with dark dots. But when the researchers spotlighted the frogs with an ultraviolet flashlight, the animals glowed blue-green. The intensity of the glow was “shocking,” says Taboada of the Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” in Buenos Aires.
And it is true fluorescence. Compounds in the frogs’ skin and lymph absorb the energy of shorter UV wavelengths and release it in longer wavelengths, the researchers report online March 13 in Proceedings of the National Academy of Sciences. But why bother, without a black bulb? Based on what he knows about a related tree frog’s vision, Taboada suggests that faint nocturnal light is enough to make the frogs more visible to their own kind. When twilight or moonlight reflects from their skin, the fluorescence accounts for 18 to 30 percent of light emanating from the frog, the researchers calculate.
Polka dot frogs, common in the Amazon Basin, have plenty to see in the tangled greenery where they breed. Males stake out multilevel territories in vast floating tangles of water hyacinths and other aquatic plants. When a territory holder spots a poaching male, frog grappling and wrestling ensues. Taboada can identify a distinctive short treble bleat “like the cry of a baby,” he says, indicating a frog fight.
Males discovering a female give a different call, which Taboada could not be coaxed to imitate over Skype. The polka dot frogs’ courtship is “complex and beautiful,” he says. For instance, a male has two kinds of secretion glands on the head and throat. During an embrace, he nudges and presses his alluring throat close to a female’s nose. If she breaks off the encounter, he goes back to clambering in rough figure eights among his hyacinths, patrolling for perhaps the blue-green ghost of another chance.